BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C04LP1|AL426333
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig205 1487 0.0
>3x_Contig205
Length = 1544
Score = 1487 bits (749), Expect = 0.0
Identities = 785/797 (98%), Gaps = 1/797 (0%)
Strand = Plus / Minus
Query: 1 ttcacattgcagtatatataaagaaaaaaacagctaacggcatagatgcacataatgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 ttcacattgcagtatatataaagaaaaaaacagctaacggcatagatgcacataatgagt 1399
Query: 61 gagamagaacaatacaatagagtcctgaagatatgaatcagaggtgaaaaccaggaacaa 120
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1398 gagaaagaacaatacaatagaggcctgaagatatgaatcagaggtgaaaaccaggaacaa 1339
Query: 121 tgagcgatgcaagcttcattgtataaagaggtacccaatcaagagtgatcacgcattgtg 180
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1338 tgagcgatgcaagcttcattgtataaagag-taccctgtcaagagtgatcacgcattgtg 1280
Query: 181 tgtcatatccagtgccaattgatggtcttgtgttcgcttttttttatgagtcactcttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 tgtcatatccagtgccaattgatggtcttgtgttcgcttttttttatgagtcactcttac 1220
Query: 241 tgatctctcaataggatggtgcatcttatcaaaaaattgctctctgattaggaattaatt 300
|| ||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 1219 tggtctgtcaataggatggtgcatcttatgagaaaattgctctctgattaggaattaatt 1160
Query: 301 ccgtgttcgaaccccacttggaccactttttgaaaagacaatgatgcaatgttagctata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 ccgtgttcgaaccccacttggaccactttttgaaaagacaatgatgcaatgttagctata 1100
Query: 361 tgataatattagtccgtatctatataatgatgtgtttaaagggtaccgggctataagtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 tgataatattagtccgtatctatataatgatgtgtttaaagggtaccgggctataagtat 1040
Query: 421 ctcttgcataggtagaaacaccatttttcgaatttgtatctccatttaaacaaaatgttt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 gtcttgcataggtagaaacaccatttttcgaatttgtatctccatttaaacaaaatgttt 980
Query: 481 ctgttgtgtagattgacttctatatcgttctgatcgaatgtgaacttcccactgcgcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 ctgttgtgtagattgacttctatatcgttctgatcgaatgtgaacttcccactgcgcaat 920
Query: 541 agttgttgttggaatgcaattatgatgaaattgaaatagaatctgactgctagtggaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 agttgttgttggaatgcaattatgatgaaattgaaatagaatctgactgctagtggaact 860
Query: 601 aaagttagcaatatgatgaggaaaaattcatagccgctagaagcactcttagaagtatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 aaagttagcaatatgatgaggaaaaattcatagccgctagaagcactcttagaagtatct 800
Query: 661 actttagttgagatcgtggatgtggttccctcatgagctggtccaagtgcggttcccgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 actttagttgagatcgtggatgtggttccctcatgagctggtccaagtgcggttcccgcg 740
Query: 721 ctcttcaagtccgtwacgtcagtgtagccctcctggctgaaccacacagcagtgaaccat 780
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 739 ctcttcaagtccgtaacgtcagtggagccctcctggctgaaccacacagcagtgaaccat 680
Query: 781 aagcagtaaatgcaact 797
|||||||||||||||||
Sbjct: 679 aagcagtaaatgcaact 663
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5980
Number of Sequences: 1807
Number of extensions: 5980
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)